Comments for LCS & GBML Central http://gbml.org The LCS and GBML community stop Thu, 17 Feb 2011 04:58:24 +0000 hourly 1 http://wordpress.org/?v=3.3.1 Comment on IWLCS 2008 call for papers by admin http://gbml.org/2008/01/24/iwlcs-2008-call-for-papers/#comment-48 admin Thu, 17 Feb 2011 04:58:24 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=166#comment-48 This should do http://gbml.org/feed/ This should do http://gbml.org/feed/

]]> Comment on IWLCS 2008 call for papers by Irving Hallowich http://gbml.org/2008/01/24/iwlcs-2008-call-for-papers/#comment-43 Irving Hallowich Tue, 01 Feb 2011 08:12:47 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=166#comment-43 Hello, for some reason when i place your feed into google reader, it won?t do the job. Can you give me the Rss hyperlink simply to be certain I?m using probably the most suitable 1? Hello, for some reason when i place your feed into google reader, it won?t do the job. Can you give me the Rss hyperlink simply to be certain I?m using probably the most suitable 1?

]]> Comment on Python LCS Implementations (GALE & GAssist) for SNP Environment by admin http://gbml.org/2010/06/10/python-lcs-implementations-gale-gassist-for-snp-environment/#comment-35 admin Tue, 09 Nov 2010 05:20:16 +0000 http://gbml.org/?p=5307#comment-35 Thanks for the note! I just fixed the link. Thanks for the note! I just fixed the link.

]]> Comment on Python LCS Implementations (GALE & GAssist) for SNP Environment by Arech http://gbml.org/2010/06/10/python-lcs-implementations-gale-gassist-for-snp-environment/#comment-34 Arech Sat, 30 Oct 2010 21:26:18 +0000 http://gbml.org/?p=5307#comment-34 Hi! There's a wrong link for GALE file. It points to GAssist.zip, while should point to http://gbml.org/wp-content/uploads/2010/06/Urbanowicz_GALE_2010.zip Anyway, big thanks for sharing! I'll try to use it in my studies... Hi!
There’s a wrong link for GALE file. It points to GAssist.zip, while should point to http://gbml.org/wp-content/uploads/2010/06/Urbanowicz_GALE_2010.zip

Anyway, big thanks for sharing! I’ll try to use it in my studies…

]]> Comment on Python LCS Implementations (XCS, UCS, MCS) for SNP Environment by Ryan J. Urbanowicz http://gbml.org/2010/03/24/python-lcs-implementations-xcs-ucs-mcs-for-snp-environment/#comment-26 Ryan J. Urbanowicz Fri, 16 Jul 2010 19:31:57 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=3667#comment-26 The sample datasets included for *_Test.py were designed to model only partially penetrant epistatic, and heterogeneous effects. So even if the a given LCS was perfectly optimized and run for an infinate amount of time, it could not reach a testing accuracy of 100%. I'm not sure off hand what the max is for these datasets, but I'd estimate somewhere between 60-75% max testing accuracy. Each of these implementations were written specific to our problem domain, and will likely require modifications to address others. Hope that helps! The sample datasets included for *_Test.py were designed to model only partially penetrant epistatic, and heterogeneous effects. So even if the a given LCS was perfectly optimized and run for an infinate amount of time, it could not reach a testing accuracy of 100%. I’m not sure off hand what the max is for these datasets, but I’d estimate somewhere between 60-75% max testing accuracy. Each of these implementations were written specific to our problem domain, and will likely require modifications to address others. Hope that helps!

]]> Comment on Python LCS Implementations (XCS, UCS, MCS) for SNP Environment by Chris http://gbml.org/2010/03/24/python-lcs-implementations-xcs-ucs-mcs-for-snp-environment/#comment-25 Chris Fri, 16 Jul 2010 17:44:43 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=3667#comment-25 I ran the *_Test.py files for the XCS, UCS, and MCS algorithms. They all appear to do little better at classifying a binary class than a random flip of a coin. Am I reading these results right? e.g. for UCS, it says "89 out of 160 correctly classified." for a 55% accuracy? I ran the *_Test.py files for the XCS, UCS, and MCS algorithms. They all appear to do little better at classifying a binary class than a random flip of a coin. Am I reading these results right?

e.g. for UCS, it says “89 out of 160 correctly classified.” for a 55% accuracy?

]]> Comment on Python LCS Implementations (GALE & GAssist) for SNP Environment by Xavier Llorà » Blog Archive » GAssist and GALE Now Available in Python http://gbml.org/2010/06/10/python-lcs-implementations-gale-gassist-for-snp-environment/#comment-22 Xavier Llorà » Blog Archive » GAssist and GALE Now Available in Python Fri, 11 Jun 2010 17:06:47 +0000 http://gbml.org/?p=5307#comment-22 [...] GAssist and GALE [...] [...] GAssist and GALE [...]

]]> Comment on NIGEL 2006 revisited (Part VI): Bacardit by Xavier Llorà » Blog Archive » NIGEL 2006 Part VI: Bacardit http://gbml.org/2009/07/13/nigel-2006-revisited-part-vi-bacardit/#comment-21 Xavier Llorà » Blog Archive » NIGEL 2006 Part VI: Bacardit Mon, 13 Jul 2009 23:59:48 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=2163#comment-21 [...] coming back from GECCO I just uploaded the last of the NIGEL 2006 talks at LCS & GBML Central. This last talk was by Jaume Bacardit and GBML for protein structure [...] [...] coming back from GECCO I just uploaded the last of the NIGEL 2006 talks at LCS & GBML Central. This last talk was by Jaume Bacardit and GBML for protein structure [...]

]]> Comment on NIGEL 2006 revisited (Part IV): Llorà and Casillas by LCS & GBML Central » Blog Archive » NIGEL 2006 Part IV: Llorà vs. Casillas http://gbml.org/2009/06/08/nigel-2006-revisited-part-iv-llora-and-casillas/#comment-19 LCS & GBML Central » Blog Archive » NIGEL 2006 Part IV: Llorà vs. Casillas Mon, 29 Jun 2009 18:38:34 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=821#comment-19 [...] more NIGEL 2006 talks are available at LCS & GBML Central. This week Xavier Llorà presents how linkage learning can be achieve in Pittsburgh LCS, whereas [...] [...] more NIGEL 2006 talks are available at LCS & GBML Central. This week Xavier Llorà presents how linkage learning can be achieve in Pittsburgh LCS, whereas [...]

]]> Comment on NIGEL 2006 revisited (Part II): Booker and Dasgupta by LCS & GBML Central » Blog Archive » NIGEL 2006 Part II: Dasgupta vs. Booker http://gbml.org/2009/05/11/nigel-2006-revisited-part-ii-booker-and-dasgupta/#comment-17 LCS & GBML Central » Blog Archive » NIGEL 2006 Part II: Dasgupta vs. Booker Mon, 29 Jun 2009 18:38:18 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=635#comment-17 [...] second weekly release of NIGEL 2006 talks is available at LCS & GBML Central. This week Dipankar Dasgupta reviews the negative selection algorithm, where as Lashon Booker [...] [...] second weekly release of NIGEL 2006 talks is available at LCS & GBML Central. This week Dipankar Dasgupta reviews the negative selection algorithm, where as Lashon Booker [...]

]]> Comment on NIGEL 2006 revisited (Part I): Wilson and Goldberg by LCS & GBML Central » Blog Archive » Transcoding NIGEL 2006 videos http://gbml.org/2009/05/04/nigel-2006-revisited-part-i-wilson-and-goldberg/#comment-16 LCS & GBML Central » Blog Archive » Transcoding NIGEL 2006 videos Mon, 29 Jun 2009 18:38:01 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=603#comment-16 [...] Last week Pier Luca Lanzi was visiting IlliGAL. Yesterday, before he left for Chicago, we went for one last brunch.  He mentioned that he liked a lot the videos we shot during NIGEL 2006. Thinking about it we agreed would be useful to recover the videos and upload them into some of the usual video sharing site suspects. Currently they are hosted, for long term storage purposes, at NCSA’s web archive. I spent sometime retrieving them from the archive (they are pretty fat and encoded in wmv) and I stated transcoding it in m4a. My plan? Make them available via Vimeo and LCS & GBML Central. Also, I will be uploading the presentation slides to SlideShare and also make them available via LCS & GBML Central. Update: The first two videos (Wilson and Goldberg) are already available at LCS & GBML Central. [...] [...] Last week Pier Luca Lanzi was visiting IlliGAL. Yesterday, before he left for Chicago, we went for one last brunch.  He mentioned that he liked a lot the videos we shot during NIGEL 2006. Thinking about it we agreed would be useful to recover the videos and upload them into some of the usual video sharing site suspects. Currently they are hosted, for long term storage purposes, at NCSA’s web archive. I spent sometime retrieving them from the archive (they are pretty fat and encoded in wmv) and I stated transcoding it in m4a. My plan? Make them available via Vimeo and LCS & GBML Central. Also, I will be uploading the presentation slides to SlideShare and also make them available via LCS & GBML Central. Update: The first two videos (Wilson and Goldberg) are already available at LCS & GBML Central. [...]

]]> Comment on NIGEL 2006 revisited (Part IV): Llorà and Casillas by Xavier Llorà » Blog Archive » NIGEL 2006 Part IV: Llorà vs. Casillas http://gbml.org/2009/06/08/nigel-2006-revisited-part-iv-llora-and-casillas/#comment-18 Xavier Llorà » Blog Archive » NIGEL 2006 Part IV: Llorà vs. Casillas Mon, 29 Jun 2009 18:35:45 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=821#comment-18 [...] more NIGEL 2006 talks are available at LCS & GBML Central. This week Xavier Llorà presents how linkage learning can be achieve in Pittsburgh LCS, whereas [...] [...] more NIGEL 2006 talks are available at LCS & GBML Central. This week Xavier Llorà presents how linkage learning can be achieve in Pittsburgh LCS, whereas [...]

]]> Comment on NIGEL 2006 revisited (Part V): Bernadó and Lanzi by Xavier Llorà » Blog Archive » NIGEL 2006 Part V: Bernardó vs. Lanzi http://gbml.org/2009/06/29/nigel-2006-revisited-part-v-bernado-and-lanzi/#comment-20 Xavier Llorà » Blog Archive » NIGEL 2006 Part V: Bernardó vs. Lanzi Mon, 29 Jun 2009 18:34:20 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=2114#comment-20 [...] the vacation break, two more NIGEL 2006 talks are available at LCS & GBML Central. This week Ester Bernardó presents how LCS can perform in the presence of class imbalance, whereas [...] [...] the vacation break, two more NIGEL 2006 talks are available at LCS & GBML Central. This week Ester Bernardó presents how LCS can perform in the presence of class imbalance, whereas [...]

]]> Comment on NIGEL 2006 revisited (Part I): Wilson and Goldberg by Xavier Llorà » Blog Archive » Transcoding NIGEL 2006 videos http://gbml.org/2009/05/04/nigel-2006-revisited-part-i-wilson-and-goldberg/#comment-15 Xavier Llorà » Blog Archive » Transcoding NIGEL 2006 videos Tue, 05 May 2009 03:58:59 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=603#comment-15 [...] Last week Pier Luca Lanzi was visiting IlliGAL. Yesterday, before he left for Chicago, we went for one last brunch.  He mentioned that he liked a lot the videos we shot during NIGEL 2006. Thinking about it we agreed would be useful to recover the videos and upload them into some of the usual video sharing site suspects. Currently they are hosted, for long term storage purposes, at NCSA’s web archive. I spent sometime retrieving them from the archive (they are pretty fat and encoded in wmv) and I stated transcoding it in m4a. My plan? Make them available via Vimeo and LCS & GBML Central. Also, I will be uploading the presentation slides to SlideShare and also make them available via LCS & GBML Central. The first two videos (Wilson and Goldberg) are already available at LCS & GBML Central [...] [...] Last week Pier Luca Lanzi was visiting IlliGAL. Yesterday, before he left for Chicago, we went for one last brunch.  He mentioned that he liked a lot the videos we shot during NIGEL 2006. Thinking about it we agreed would be useful to recover the videos and upload them into some of the usual video sharing site suspects. Currently they are hosted, for long term storage purposes, at NCSA’s web archive. I spent sometime retrieving them from the archive (they are pretty fat and encoded in wmv) and I stated transcoding it in m4a. My plan? Make them available via Vimeo and LCS & GBML Central. Also, I will be uploading the presentation slides to SlideShare and also make them available via LCS & GBML Central. The first two videos (Wilson and Goldberg) are already available at LCS & GBML Central [...]

]]> Comment on IWLCS 2009 call for papers by LCS & GBML Central » Blog Archive » IWLCS 2009 warming up http://gbml.org/2009/03/24/iwlcs-2009-call-for-papers/#comment-12 LCS & GBML Central » Blog Archive » IWLCS 2009 warming up Tue, 07 Apr 2009 15:56:26 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=170#comment-12 [...] More information can be found in the original call for papers. [...] [...] More information can be found in the original call for papers. [...]

]]> Comment on Memetic Computing Journal special issue on Metaheuristics for Large Scale Data Mining – Extended Deadline by Xavier Llorà » Blog Archive » Deadline extended for special issue on Metaheuristics for Large Scale Data Mining http://gbml.org/2009/04/07/memetic-computing-journal-special-issue-on-metaheuristics-for-large-scale-data-mining-extended-deadline/#comment-14 Xavier Llorà » Blog Archive » Deadline extended for special issue on Metaheuristics for Large Scale Data Mining Tue, 07 Apr 2009 15:33:20 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=532#comment-14 [...] The deadline for the special issue on Metaheuristics for Large Scale Data Mining to be published by Springer’s Memetic Computing Journal has been extended till May 31, 2009. More information can be found in this post at LCS & GBML Central. [...] [...] The deadline for the special issue on Metaheuristics for Large Scale Data Mining to be published by Springer’s Memetic Computing Journal has been extended till May 31, 2009. More information can be found in this post at LCS & GBML Central. [...]

]]> Comment on Memetic Computing Journal special issue on Metaheuristics for Large Scale Data Mining – Extended Deadline by Xavier Llorà » Blog Archive » Deadline extended for special issue on Metaheuristics for Large Scale Data Mining http://gbml.org/2009/04/07/memetic-computing-journal-special-issue-on-metaheuristics-for-large-scale-data-mining-extended-deadline/#comment-13 Xavier Llorà » Blog Archive » Deadline extended for special issue on Metaheuristics for Large Scale Data Mining Tue, 07 Apr 2009 15:33:20 +0000 http://lcs-gbml.ncsa.uiuc.edu/?p=532#comment-13 [...] The deadline for the special issue on Metaheuristics for Large Scale Data Mining to be published by Springer’s Memetic Computing Journal has been extended till May 31, 2009. More information can be found in this post at LCS & GBML Central. [...] [...] The deadline for the special issue on Metaheuristics for Large Scale Data Mining to be published by Springer’s Memetic Computing Journal has been extended till May 31, 2009. More information can be found in this post at LCS & GBML Central. [...]

]]> Comment on LCS software by Ryan Urbanowicz http://gbml.org/2006/02/20/lcs-software/#comment-7 Ryan Urbanowicz Wed, 28 Jan 2009 19:00:53 +0000 http://www.illigal.uiuc.edu/web/lcs-n-gbml/2006/02/20/lcs-software/#comment-7 I have been trying to reach this website for months with no success. Is it permanently down, or will it be up again soon? I have been trying to reach this website for months with no success. Is it permanently down, or will it be up again soon?

]]> Comment on Multi-Objective Machine Learning by Xavier Llorà » Blog Archive » GALE is back! http://gbml.org/2006/01/31/multi-objective-machine-learning/#comment-6 Xavier Llorà » Blog Archive » GALE is back! Tue, 30 Dec 2008 09:43:05 +0000 http://www.illigal.uiuc.edu/web/lcs-n-gbml/2006/01/31/multi-objective-machine-learning/#comment-6 [...] Workshop on Learning Classifier Systems (IWLCS) from 2001-2005, and a two book chapter in Multi-Objective Machine Learning and Applications of Learning Classifier [...] [...] Workshop on Learning Classifier Systems (IWLCS) from 2001-2005, and a two book chapter in Multi-Objective Machine Learning and Applications of Learning Classifier [...]

]]> Comment on Multi-Objective Machine Learning by Xavier Llorà » Blog Archive » GALE is back! http://gbml.org/2006/01/31/multi-objective-machine-learning/#comment-5 Xavier Llorà » Blog Archive » GALE is back! Tue, 30 Dec 2008 09:43:05 +0000 http://www.illigal.uiuc.edu/web/lcs-n-gbml/2006/01/31/multi-objective-machine-learning/#comment-5 [...] Workshop on Learning Classifier Systems (IWLCS) from 2001-2005, and a two book chapter in Multi-Objective Machine Learning and Applications of Learning Classifier [...] [...] Workshop on Learning Classifier Systems (IWLCS) from 2001-2005, and a two book chapter in Multi-Objective Machine Learning and Applications of Learning Classifier [...]

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